Load matlab struct in python
Would you share more details about how the file "lib.mat" is created? I tried following steps: Show >>lib.name='hello' >>Strs(1).id=1 >>Strs(2).id=2 >>Strs(3).id=3 >>lib.Strs = Strs >>lib.StrList = {1,2,3} >>save('lib', 'lib') This what I see in Python: >>>Obj = eng.load('lib.mat')['lib'] ... ValueError: only a scalar struct can be returned from MATLAB This is the expected behavior as Struct array is not supported according to the doc: https://www.mathworks.com/help/matlab/matlab_external/handle-data-returned-from-matlab-to-python.html In this case, "lib" itself is a scalar struct but the element "Strs" is a struct array. I have a mat-file that I accessed using
From matlab, example.mat contains the following struct
In matlab, I can access data as easy as data2.LON, etc.. It's not as trivial in python. It give me several option though like
Is is possible to preserve the same structure in python? If not, how to best access the data? The present python code that I am using is very difficult to work with. Thanks asked Aug 14, 2012 at 14:51
mikePmikeP 7812 gold badges10 silver badges19 bronze badges 5 answered Aug 14, 2012 at 15:22
mikePmikeP 7812 gold badges10 silver badges19 bronze badges 1 When I need to load data into Python from MATLAB that is stored in an array of structs {strut_1,struct_2} I extract a list of keys and values from the object that I load with
answered Mar 4, 2018 at 17:47
Austin DowneyAustin Downey 8732 gold badges10 silver badges24 bronze badges this will return the mat structure as a dictionary
answered Dec 8, 2020 at 8:36
idan357idan357 3224 silver badges14 bronze badges (!) In case of nested structures saved in
Then use the code by mergen in scipy.io.loadmat nested structures (i.e. dictionaries)
answered Apr 29, 2015 at 20:24
brauliobraulio 4202 silver badges9 bronze badges How do I load a MATLAB file into Python?Read Matlab mat Files in Python. Use the scipy.io Module to Read .mat Files in Python.. Use the NumPy Module to Read mat Files in Python.. Use the mat4py Module to Read mat Files in Python.. Use the matlab.engine Module to Read mat Files in Python.. How do I run a .MAT file in Python?How to read .. Install scipy. Similar to how we use the CSV module to work with . ... . Import the scipy. io. ... . Parse the . mat file structure. ... . Use Pandas dataframes to work with the data. Now that you have the information and the data retrieved, how would you work with it?. How do I load a .MAT file in MATLAB?To load a subset of variables from a MAT-file on the Home tab, in the Variable section, click Import Data. Select the MAT-file you want to load and click Open. You also can drag the desired variables from the Current Folder browser Details panel of the selected MAT-file to the Workspace browser.
How do I read a .MAT file?First read the documentation.. Use a hex editor (such as HxD) and look into a reference . mat -file you want to parse.. Try to figure out the meaning of each byte by saving the bytes to a . ... . Use classes to save each data element (such as miCOMPRESSED , miMATRIX , mxDOUBLE , or miINT32 ). |